Risk assessmentindependent cross-checkabstract checked★ key study I-CHK-115 in-depth review

Most resistant gut bacteria in Dutch people come from other people, about one fifth from food

Attributable sources of community-acquired carriage of Escherichia coli containing beta-lactam antibiotic resistance genes: a population-based modelling study.

Overview

Mughini-Gras L et al.. Lancet Planet Health 2019 · PMID 31439317 · DOI 10.1016/S2542-5196(19)30130-5

Food accounted for about 19% of community carriage of ESBL E. coli; human-to-human spread for about 60%.

Does the study support the specific claim? Partly · Methodological quality: moderate

Original publication

Plain-language summary

Study explained simply
What did the researchers want to find out?

What proportion of community-acquired ESBL/pAmpC E. coli carriage is attributable to human, animal, food and environmental sources?

How was the study done?

Population-based source-attribution modelling (ESBL/pAmpC genes), Netherlands 2005-2017

How many people, animals or samples were studied?

1,220 human and 6,275 non-human gene occurrences

What was actually found?

Human-to-human transmission within/between households 60.1% (95% CrI 40.0-73.5); secondary transmission from high-risk groups 6.9%; food 18.9% (7.0-38.3); companion animals 7.9%; farm animals (non-occupational) 3.6%; environment 2.6%. R0 for intracommunity transmission 0.63.

How large was the observed effect?

Human-to-human transmission within/between households 60.1% (95% CrI 40.0-73.5); secondary transmission from high-risk groups 6.9%; food 18.9% (7.0-38.3); companion animals 7.9%; farm animals (non-occupational) 3.6%; environment 2.6%. R0 for intracommunity transmission 0.63.

What do the results mean in everyday life?

Food is a real but not the main route for these resistant bacteria in the Netherlands.

What are the study's limitations?

Model assumptions; Food not split by type in abstract; Erratum published

What does it say about Elawady's specific claim?

Supports the food-chain route but limits its size.

Do the results apply to Germany and Europe?

Directly EU-relevant (Netherlands).

What can explicitly not be concluded from this study?

Not specific to chicken; different in high-use countries.

Scientific in-depth review

1. Full reference

Authors
Mughini-Gras L et al.
Journal
Lancet Planet Health
Year
2019
Identifier
PMID 31439317 DOI 10.1016/S2542-5196(19)30130-5
Verification
verified – PubMed efetch 2026-10-26; Crossref 2026-10-26
Retracted
no
Corrections

ErratumIn: Lancet Planet Health 2019;3(10):e408

Extent checked
abstract only
Conflicts of interest and funding

1Health4Food, Dutch Ministry of Economic Affairs, EU Horizon 2020 One Health EJP (abstract)

2. Research question

What proportion of community-acquired ESBL/pAmpC E. coli carriage is attributable to human, animal, food and environmental sources?

3. Study design and population

Study design
Risk assessment – Population-based source-attribution modelling (ESBL/pAmpC genes), Netherlands 2005-2017
Population

Dutch population; gene data from humans, animals, food, water, wild birds

Country

Netherlands

Period

2005-2017

Sample size

1,220 human and 6,275 non-human gene occurrences

Inclusion and exclusion criteria

as described in the abstract

4. Methods and endpoints

Exposure / intervention

Exposure to sources (food, animals, environment, other humans)

Comparator

Other sources

Endpoints

Attributable share of community carriage

Statistical methods

as reported in the abstract

5. Actual results

Results

Human-to-human transmission within/between households 60.1% (95% CrI 40.0-73.5); secondary transmission from high-risk groups 6.9%; food 18.9% (7.0-38.3); companion animals 7.9%; farm animals (non-occupational) 3.6%; environment 2.6%. R0 for intracommunity transmission 0.63.

Absolute risks

not reported

Authors' conclusion

Humans are the main source of community carriage, but non-human sources are needed to sustain spread.

6. Strengths

  • Large national dataset
  • Explicit uncertainty

7. Weaknesses

  • Model assumptions
  • Food not split by type in abstract
  • Erratum published

8. Risk of bias

Orienting tool
none applicable
Type of assessment
simplified assessment (abstract only)
Full formal assessment
no
Overall risk of bias
some concerns
Rationale

Modelling study.

9. Assessment of the statistical interpretation

Food (including chicken) contributes about one fifth of carriage, with wide uncertainty; most carriage is spread between people.

10. Relevance to the specific claim

Quantifies how much resistant E. coli carriage comes from food versus other sources.

11. Independent contrary findings

12. Transferability to Germany and Europe

13. Overall methodological judgement

Food accounted for about 19% of community carriage of ESBL E. coli; human-to-human spread for about 60%.

Multidimensional assessment
Multidimensional assessment
Authenticity of the sourceverified
Methodological qualitymoderate
Risk of biassome concerns
Precision of resultslow
Directnessdirect
Reproducibilitypartly replicated
Consistency with the overall evidenceconsistent
Regional transferabilitymoderate
Adequacy of the interpretation (by the archive)not applicable

14. Open questions

15. Linked fact checks